منابع مشابه
Enrichment of OBO ontologies
This paper describes a frame-based integration of the three GO subontologies, the Chemical Entities of Biological Interest ontology, and the Cell Type Ontology in which relationships are modeled in a way that better captures the semantics between biological concepts represented by the terms, rather than between the terms themselves, than previous frame-based efforts. We also describe a methodol...
متن کاملIdentification of OBO nonalignments and its implications for OBO enrichment
MOTIVATION Existing projects that focus on the semiautomatic addition of links between existing terms in the Open Biomedical Ontologies can take advantage of reasoners that can make new inferences between terms that are based on the added formal definitions and that reflect nonalignments between the linked terms. However, these projects require that these definitions be necessary and sufficient...
متن کاملHow orthogonal are the OBO Foundry ontologies?
BACKGROUND Ontologies in biomedicine facilitate information integration, data exchange, search and query of biomedical data, and other critical knowledge-intensive tasks. The OBO Foundry is a collaborative effort to establish a set of principles for ontology development with the eventual goal of creating a set of interoperable reference ontologies in the domain of biomedicine. One of the key re...
متن کاملThe UNEP Ontologies and the OBO Foundry
It is now generally accepted that wherever we need to address multiple different kinds of data deriving from multiple different kinds of sources, a strategy is required to ensure interoperability across the various systems involved. The United Nations Environmental Program (UNEP) is developing an ontology for use in their knowledge management platform—the Sustainable Development Goals Interface...
متن کاملOBOPedia: An Encyclopaedia of Biology Using OBO Ontologies
Ontologies contain knowledge about a domain for use by tools or humans. A source of knowledge should be usable by a human to ‘find out about’ or learn about the entities of a domain and their relationship to each other. The corpus of biomedical ontologies now contains ‘encyclopaedic’ knowledge about biology and should be capable of being used by humans to learn about entities in molecular biolo...
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ژورنال
عنوان ژورنال: Journal of Biomedical Informatics
سال: 2007
ISSN: 1532-0464
DOI: 10.1016/j.jbi.2006.07.003